[GLASSFISH-21389] Deploy fails "JAR entry META-INF/beans.xml not found" Created: 08/Jul/15  Updated: 08/Jul/15

Status: Open
Project: glassfish
Component/s: cdi
Affects Version/s: 4.1
Fix Version/s: None

Type: Bug Priority: Critical
Reporter: tiran1984 Assignee: jjsnyder83
Resolution: Unresolved Votes: 1
Labels: None
Remaining Estimate: Not Specified
Time Spent: Not Specified
Original Estimate: Not Specified


 Description   

The deploy fails with with this error! But on this path is the jar and in the jar is on the right place the beans.xml

[#|2015-07-08T11:05:39.523+0200|SEVERE|glassfish 4.1|javax.enterprise.system.core|_ThreadID=258;_ThreadName=admin-listener(47);_TimeMillis=1436346339523;_LevelValue=1000;_MessageID=NCLS-CORE-00026;|
Exception during lifecycle processing
org.jboss.weld.exceptions.IllegalStateException: WELD-001201: Error loading beans.xml jar:file:/D:/glassfish4/glassfish/domains/domain1/applications/FMEAR/lib/bl-3.7.0-SNAPSHOT.jar!/META-INF/beans.xml
at org.jboss.weld.xml.BeansXmlParser.parse(BeansXmlParser.java:97)
at org.jboss.weld.bootstrap.WeldBootstrap.parse(WeldBootstrap.java:131)
at org.glassfish.weld.BeanDeploymentArchiveImpl.parseBeansXML(BeanDeploymentArchiveImpl.java:755)
at org.glassfish.weld.BeanDeploymentArchiveImpl.populate(BeanDeploymentArchiveImpl.java:523)
at org.glassfish.weld.BeanDeploymentArchiveImpl.<init>(BeanDeploymentArchiveImpl.java:150)
at org.glassfish.weld.RootBeanDeploymentArchive.createModuleBda(RootBeanDeploymentArchive.java:94)
at org.glassfish.weld.RootBeanDeploymentArchive.<init>(RootBeanDeploymentArchive.java:87)
at org.glassfish.weld.DeploymentImpl.createLibJarBda(DeploymentImpl.java:555)
at org.glassfish.weld.DeploymentImpl.scanForLibJars(DeploymentImpl.java:547)
at org.glassfish.weld.DeploymentImpl.<init>(DeploymentImpl.java:126)
at org.glassfish.weld.WeldDeployer.load(WeldDeployer.java:473)
at org.glassfish.weld.WeldDeployer.load(WeldDeployer.java:101)
at org.glassfish.internal.data.ModuleInfo.load(ModuleInfo.java:206)
at org.glassfish.internal.data.ApplicationInfo.load(ApplicationInfo.java:305)
at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:496)
at com.sun.enterprise.v3.server.ApplicationLifecycle.enable(ApplicationLifecycle.java:2169)
at com.sun.enterprise.v3.server.ApplicationLifecycle.enable(ApplicationLifecycle.java:113)
at org.glassfish.deployment.admin.EnableCommand.execute(EnableCommand.java:262)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:539)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:535)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:356)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$2.execute(CommandRunnerImpl.java:534)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:565)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:557)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:356)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:556)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1464)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$1300(CommandRunnerImpl.java:109)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1846)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1722)
at com.sun.enterprise.v3.admin.AdminAdapter.doCommand(AdminAdapter.java:534)
at com.sun.enterprise.v3.admin.AdminAdapter.onMissingResource(AdminAdapter.java:224)
at org.glassfish.grizzly.http.server.StaticHttpHandlerBase.service(StaticHttpHandlerBase.java:189)
at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:459)
at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:167)
at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:201)
at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:175)
at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:235)
at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
at org.glassfish.grizzly.portunif.PUFilter.handleRead(PUFilter.java:231)
at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
at org.glassfish.grizzly.portunif.PUFilter.handleRead(PUFilter.java:231)
at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:284)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:201)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:133)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:112)
at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:561)
at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:112)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:117)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:56)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:137)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:565)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:545)
at java.lang.Thread.run(Thread.java:744)
Caused by: java.io.FileNotFoundException: JAR entry META-INF/beans.xml not found in D:\glassfish4\glassfish\domains\domain1\applications\FMEAR\lib\bl-3.7.0-SNAPSHOT.jar
at sun.net.www.protocol.jar.JarURLConnection.connect(JarURLConnection.java:140)
at sun.net.www.protocol.jar.JarURLConnection.getInputStream(JarURLConnection.java:150)
at java.net.URL.openStream(URL.java:1037)
at org.jboss.weld.xml.BeansXmlParser.parse(BeansXmlParser.java:74)
... 67 more



 Comments   
Comment by tiran1984 [ 08/Jul/15 ]

I use Windows 7.
The jar can not deleted on filesystem, so long the server is running





[GLASSFISH-18514] CDI does not get enabled on server start for a WAB bundle, the war has to be redeployed after the server starts for CDI to be enabled. Created: 15/Mar/12  Updated: 20/Mar/13

Status: Open
Project: glassfish
Component/s: cdi, OSGi-JavaEE
Affects Version/s: 3.1.2
Fix Version/s: future release

Type: Bug Priority: Critical
Reporter: aaronjwhiteside Assignee: Sivakumar Thyagarajan
Resolution: Unresolved Votes: 1
Labels: None
Remaining Estimate: Not Specified
Time Spent: Not Specified
Original Estimate: Not Specified

Attachments: Text File server.log    

 Description   

CDI does not get enabled on server start for a WAB bundle, the war has to be redeployed after the server starts for CDI to be enabled.

Please see attached server.log

You can see after the server has started I manually redeployed the WAB and CDI was enabled that time.

If I do not redeploy the WAB CDI is not enabled and I get NPE when trying to access a JAX-RS resource that @Inject's a @OSGiService(dynamic=true).



 Comments   
Comment by aaronjwhiteside [ 16/Mar/12 ]

So I think I tracked down the issue.

The org.glassfish.fighterfish.osgi-cdi bundle which provides the cdi support for WAB's has a run level of 2. However any bundle that is deployed under <domain>autodeploy/bundles always has a run level of 1.

So when you start glassfish that already has bundles under autodeploy/bundles and no osgi-cache (to tell it the deploy order, if you deployed something after the server was already started) it'll start the osgi-cdi bundle after the WAB bundle. And thus CDI support is never enabled for WAB's.

I tried adding

felix.fileinstall.start.level=4 

to glassfish3/glassfish/config/osgi.properties

But the bundles deployed from <domain>/autodeploy/bundles still seem to start in runlevel 1.

Comment by aaronjwhiteside [ 16/Mar/12 ]

For reference:
http://felix.apache.org/site/apache-felix-file-install.html

Comment by aaronjwhiteside [ 16/Mar/12 ]

OK so it turns out that all the felix.fileinstall* properties in osgi.properties are totally ignored and should probably be removed.

The real file doing the configuration is:

glassfish3/glassfish/modules/autostart/org.apache.felix.fileinstall-autodeploy-bundles.cfg

However if I add the line:

felix.fileinstall.start.level=4

to this file, it still does not set the run level for bundles under autodeploy/bundles, they still start at run level one.

However I do get a log message printed out:

[#|2012-03-15T20:08:20.322-0400|INFO|glassfish3.1.2|javax.enterprise.system.std.com.sun.enterprise.server.logging|_ThreadID=12;_ThreadName=Thread-2;|felix.fileinstall.start.level set, but not a int: 4 |#]

Which is interesting, apparently 4 really isn't an int.. I guess this is an ERROR even though it says INFO.. or maybe a WARN as it seems to have ignored the config.

Without this fixed OSGi is pretty much useless.

Comment by aaronjwhiteside [ 16/Mar/12 ]

Fixing this issue will probably fix another bug I reported too.

http://java.net/jira/browse/GLASSFISH-18508

And a bunch of other random weird stuff I was pulling my hair out over..

Comment by aaronjwhiteside [ 16/Mar/12 ]

OK so after more investigation it turns out you have to set:

felix.fileinstall.start.level=4

in osgi.properties AND org.apache.felix.fileinstall-autodeploy-bundles.cfg or less it does not get picked up. This is probably a bug too.

(and obviously, even through I omitted it you must set glassfish.osgi.start.level.final=4 in osgi.properties too).

So now I can see that the start level of my WAB bundle is really 4, however CDI still does NOT get enabled. I have to remove the war and redeploy it again, after the server has started for CDI to kicked in.

So my assumption that the start level's were the issue seems to be moot, however having a start level of 1 for the bundles under autodeploy/bundles and a start level of 2 for most of glassfish's osgi to jee integration bundles is still a bug. The bundles under autodeploy/bundles should start in start level 4.

So the question is now, if not start levels, what is causing CDI to not load and required a redeploy of the war to be enabled???

Comment by Sanjeeb Sahoo [ 16/Mar/12 ]

No, I don't understand some of your observations. This is how things are supposed to work:

no osgi-cache:
fileinstall is started at start level 2 and it is configured to start after modules/autostart/,
which means first time (same as no osgi cache) the server starts, fileinstall will come into effect
after all bundles in modules/autostart/. Once fileinstall is started, it will then go onto deploy
autodeploy/bundles/. Now, let's say one such bundle is a WAB that uses CDI.
Since osgi-cdi is already installed,when the WAB is processed, osgi-cdi will process the WAB as well.

Let's stop the server and restart. Upon restart, the WAB is started at start level 1 which means it is
started before osgi-web-container and osgi-cdi are started. But, the WAB processing is deferred until
osgi-web-container is started. When server reaches start level 2, osgi-web-container is started and it
processes the WAB. It does not matter whether osgi-cdi is active or not. It only has to be in INSTALLED
state for it to be useful. So, when the WAB is processed by osgi-web-container, osgi-cdi will be used
as well.

So, I don't see a case why osgi-cdi is not used in your case. Could you supply a test case with instructions?
I tried a WAB+CDI test case and could not reproduce.

A note about fileinstall start level:
The bundles in autodeploy/bundles/ are started at start level 1. This seems like
a bad configuration. They should have start level matching that of fileinstall, which is 2. I will
open a separate issue to do this. But, I can't see it affecting any functionality now.

To change the start level of bundles in autodeploy/bundles, edit osgi.properties file.
modules/autostart/o.a.f.fileinstall-autodeploy-bundles.cfg is not used any more.
If you set a start level higher than 2, then you must also configure the server to change the
start level to that value. Currently, server sets final start level to 2 using the property:
glassfish.osgi.start.level.final=2
Change it to the higher value, else your bundles in autodeploy/bundles will never get activated.

Comment by aaronjwhiteside [ 16/Mar/12 ]

After clearing the osgi-cache (I keep forgetting) CDI now works, so changing the start level fixed the issue.

Can this please be fixed in the next release?

Comment by Sanjeeb Sahoo [ 17/Mar/12 ]

What you want to be fixed? start level of bundles/autodeploy/? Sure it can be (could you file an issue under osgi category?), but, as I mentioned earlier, I don't understand why you had to change start level. Are you really sure things didn't work for you as is? I would love to understand it better. Do you have a reproducible test case?

Comment by tlcksnyder [ 20/Mar/13 ]

not attempting to fix without a reproducible test case, or better description of reproduction steps.





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